Episode 1
Batman and Superman find themselves teamed up when Lex Luthor begins his operations in Gotham City to take down his arch-nemesis, and employs a horde of the Batman's villains to do so.
Episode 2
Batman and Robin must battle Superman, who is under Lex Luthor's mind control, as the villain plans to launch a wave of robots and take over the world's armies.
Episode 3
Batman welcomes another member of the Justice League to Gotham as he teams up with Green Arrow when Vertigo, a villain who can affect people's sense of balance, arrives in the city with a diabolical plan.
Episode 4
Perpetual loser Firefly tries to upgrade his powers with the aid of his new girlfriend Blaze, but is exposed to radioactive phosphorous and takes on a new more dangerous identity as... Phosphorus.
Episode 5
Batman and Robin team up with the Flash to thwart Mirror Master's plans to trap everyone in their own mirror image.
Episode 6
Gotham citizens are bursting into hysterical laughter and dumping stolen goods into the river, and Batman is soon on the trail of the Joker.
Episode 7
Green Lantern seeks out Batman's help in locating renegade Green Lantern Sinestro, but when the villain comes to Earth, the Penguin ends up with the hero's power ring.
Episode 8
With the help of a slacker, Joker's mind is downloaded into a computer, enabling him to control the new WayneTech Nanobots. This creates a new and improved body who attempts to destroy Batman, Robin, and the original Joker.
Episode 9
A trio of college misfits use stolen mutagens from Dr. Kirk Langstrom to transform themselves into animal forms and get revenge on those who have scorned them.
Episode 10
Wrath and Scorn, two twins of the Dynamic Duo, are helping the villains of Gotham City. But what happens when both Batman and Wrath uncover each other's identities?
Episode 11
When Black Mask hires Hawkman's arch-nemesis the Shadow Thief to break him out of Arkham and assist in the theft of a meteorite, Batman must team up with fellow Justice League member Hawkman to defeat the villains.
Episode 12
The super-powered members of the Justice League begin disappearing one by one. Only Batman and Green Arrow are left to investigate and discover that old enemies are involved.
Episode 13
The heroes fight their android counterparts to recover the Justice League's powers, while the Joining prepares for its final assault on Earth.